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Glycosciences.DB structure entry #5995:
a-L-Fucp-(1-4)+
|
b-D-GlcpNAc-(1-1)-Methyl
|
a-L-Fucp-(1-2)-b-D-Galp-(1-3)+
[][METHYL]{[(1+1)][B-D-GLCPNAC]{[(3+1)][B-D-GALP]{[(2+1)][A-L-FUCP]{}}[(4+1)][A-L-FUCP]{}}}
RES
1s:methyl
2b:b-dglc-HEX-1:5
3s:n-acetyl
4b:b-dgal-HEX-1:5
5b:a-lgal-HEX-1:5|6:d
6b:a-lgal-HEX-1:5|6:d
LIN
1:1n(1+1)2o
2:2d(2+1)3n
3:2o(3+1)4d
4:4o(2+1)5d
5:2o(4+1)6d
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<substituent id="1" name="methyl" />
<basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="3" name="n-acetyl" />
<basetype id="4" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="5" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-lgal-HEX-1:5|6:d">
<stemtype id="1" type="lgal" />
<modification type="d" pos_one="6" />
</basetype>
<basetype id="6" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-lgal-HEX-1:5|6:d">
<stemtype id="1" type="lgal" />
<modification type="d" pos_one="6" />
</basetype>
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="n" childType="o">
<parent pos="1" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="2" child="3">
<linkage id="2" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="3" parent="2" child="4">
<linkage id="3" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="4" parent="4" child="5">
<linkage id="4" parentType="o" childType="d">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="5" parent="2" child="6">
<linkage id="5" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
</linkages>
</sugar>

1 - 5 of 7 entries with matching glycan part

a-L-Fucp-(1-4)+
|
b-D-GlcpNAc-(1-9)-9-hydroxy-Nonanoate-(1-1)-Methyl
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a-L-Fucp-(1-2)-b-D-Galp-(1-3)+
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Taxons: 1 |

a-L-Fucp-(1-4)+
|
b-D-GlcpNAc
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a-L-Fucp-(1-2)-b-D-Galp-(1-3)+
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Taxons: 4 |

a-L-Fucp-(1-4)+
|
b-D-GlcpNAc-(1-O)-<BSA>
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a-L-Fucp-(1-2)-b-D-Galp-(1-3)+
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Taxons |

a-L-Fucp-(1-4)+
|
b-D-GlcpNAc-(1-7)-benzyl
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a-L-Fucp-(1-2)-b-D-Galp-(1-3)+
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Taxons |

a-L-Fucp-(1-4)+
|
b-D-GlcpNAc-(1-9)-9-hydroxy-Nonanoate
|
a-L-Fucp-(1-2)-b-D-Galp-(1-3)+
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Taxons |
- Lewis B (Show) (Search Database)
Chemical Formula: | C27H47N1O19 | #C | #H | #O | #N | |
Molec. Weight: | 689 | 27 | 47 | 19 | 1 | |
# Atoms: | 94 | |||||
# Residues: | 5 | |||||
# Heavy Atoms: | 47 |
Superclasses:
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Residues:
|
1 - 1 of 1 PDB entries

PDB ID 1led:
STRUCTURES OF THE LECTIN IV OF GRIFFONIA SIMPLICIFOLIA AND ITS COMPLEX WITH THE LEWIS B HUMAN BLOOD GROUP DETERMINANT AT 2.0 ANGSTROMS RESOLUTION
Description: LECTIN (FOURTH ISOLATED FROM (GRIFFONIA SIMPLICIFOLIA)) COMPLEX WITH LEWIS B HUMAN BLOOD GROUP DETERMINANT (GS4LEB)
Source: GRIFFONIA SIMPLICIFOLIA
Experimental method: X-RAY DIFFRACTION
Resolution: 2Å
Release date: 1994-01-31
Entry features 2 distinct glycan structures [2 instances].
1 - 5 of 9 literature references

Reference #7969
Imberty A; Mikros E; Koca J; Mollicone R; Oriol R; Perez S
Computer simulation of histo-blood group oligosaccharides: energy maps of all constituting disaccharides and potential energy surfaces of 14 ABH and Lewis carbohydrate antigens
Published 1995 in Glycoconj J, 12: 331-349
Reference contains 14 structures

Reference #11267
Delbaere LTJ; Vandonselaar M; Prasad L; Quail JW; Wilson KS; Dauter Z
Structures of the lectin IV of Griffonia simplicifolia and its complex with the Lewis b human blood-group determinant at 2.0 A resolution
Published 1993 in J Mol Biol, 230: 950-965
Reference contains 2 structures

Reference #2636
Mukhopadhyay C; Bush CA
Molecular dynamics simulation of Lewis blood-groups and related oligosaccharides
Published 1991 in Biopolymers, 31: 1737-1746
Reference contains 6 structures

Reference #3067
Beierbeck H; Lemieux RU
Computer simulation studies of the solvation of oligosaccharides
Published 1990 in Can J Chem, 68: 820-827
Reference contains 1 structure

Reference #4104
Spohr U; Lemieux RU
Molecular recognition. Part VII. Synthetic, conformational, and immunochemical studies of modified Lewis b and Y human blood-group determinants to serve as probes for the combining site of the lectin IV of Griffonia simplicifolia
Published 1988 in Carbohydr Res, 174: 211-237
Reference contains 8 structures
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