Glycosciences.de - Glycosciences.DB entry 4184

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Glycosciences.DB structure entry #4184:

Format: CarbBank LINUCS GlycoCT_condensed GlycoCT_xml


 b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp


RES
1b:b-dgal-HEX-1:5
2b:b-dglc-HEX-1:5
3s:n-acetyl
4b:b-dgal-HEX-1:5
LIN
1:1o(3+1)2d
2:2d(2+1)3n
3:2o(4+1)4d


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
 <stemtype id="1" type="dgal" />
 </basetype>
 <basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <substituent id="3" name="n-acetyl" />
 <basetype id="4" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
 <stemtype id="1" type="dgal" />
 </basetype>
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="2" child="3">
 <linkage id="2" parentType="d" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="3" parent="2" child="4">
 <linkage id="3" parentType="o" childType="d">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 </sugar>

download coordinates

Corresponding entries: 5

1 - 5 of 5 entries with matching glycan part

Structure entry #2571:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-9)-9-hydroxy-Nonanoate-(1-1)-Methyl

: 3

Taxons

Structure entry #2855:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-1)-Methyl

: 6

Taxons

Structure entry #6500:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-1)-<2,2,2-trichloroethanol>

: 1

Taxons

Structure entry #9118:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-1)-<4-nitrophenol>

: 2

Taxons

Structure entry #15435:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-6)-<6-hydroxy-hexanoate-hydrazide>

Taxons

Lactosamine (Show) (Search Database)

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General Structure Data

Chemical Formula:	C₂₀H₃₅N₁O₁₆	#C	#H	#O	#N
Molec. Weight:	545	20	35	16	1
# Atoms:	72
# Residues:	3
# Heavy Atoms:	37

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Composition

Superclasses:

Hex
Hex	2
HexNAc	1

Residues:

Residue	Count
B-D-GALP	2
B-D-GLCPNAC	1

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PDB references: 2

1 - 2 of 2 PDB entries

PDB ID 2xrs: Crystal structures exploring the origins of the broader specificity of escherichia coli heat-labile enterotoxin compared to cholera toxin

Description: HEAT-LABILE ENTEROTOXIN B CHAIN

Source: ESCHERICHIA COLI

Experimental method: X-RAY DIFFRACTION

Resolution: 1.81Å

Release date: 2010-12-08

Entry features 5 distinct glycan structures [10 instances].

PDB ID 6wmo:

Description:

Source:

Experimental method: X-ray Diffraction

Resolution: 1.85Å

Release date: