Glycosciences.de - Glycosciences.DB entry 4

☰
- Add title
- Add keywords
- Add publication
- Leave comment

Glycosciences.DB structure entry #4:

■ Expand all ■ Collapse all

Format: CarbBank LINUCS GlycoCT_condensed GlycoCT_xml


 b-D-Glcp-(1-6)+
               |
          b-D-Glcp-(1-6)-b-D-Glcp-(1-6)+
               |                       |
 b-D-Glcp-(1-3)+                  b-D-Glcp-(1-6)-b-D-Glcp-(1-6)+
                                       |                       |
                         b-D-Glcp-(1-3)+                  b-D-Glcp-(1-6)-D-Glc
                                                               |
                                                 b-D-Glcp-(1-3)+


RES
1b:x-dglc-HEX-x:x
2b:b-dglc-HEX-1:5
3b:b-dglc-HEX-1:5
4b:b-dglc-HEX-1:5
5b:b-dglc-HEX-1:5
6b:b-dglc-HEX-1:5
7b:b-dglc-HEX-1:5
8b:b-dglc-HEX-1:5
9b:b-dglc-HEX-1:5
10b:b-dglc-HEX-1:5
LIN
1:1o(6+1)2d
2:2o(3+1)3d
3:2o(6+1)4d
4:4o(6+1)5d
5:5o(3+1)6d
6:5o(6+1)7d
7:7o(6+1)8d
8:8o(3+1)9d
9:8o(6+1)10d


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="x" superclass="hex" ringStart="-1" ringEnd="-1" name="x-dglc-HEX-x:x">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="4" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="6" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="7" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="8" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="9" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="10" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="o" childType="d">
 <parent pos="6" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="2" child="3">
 <linkage id="2" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="3" parent="2" child="4">
 <linkage id="3" parentType="o" childType="d">
 <parent pos="6" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="4" parent="4" child="5">
 <linkage id="4" parentType="o" childType="d">
 <parent pos="6" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="5" parent="5" child="6">
 <linkage id="5" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="6" parent="5" child="7">
 <linkage id="6" parentType="o" childType="d">
 <parent pos="6" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="7" parent="7" child="8">
 <linkage id="7" parentType="o" childType="d">
 <parent pos="6" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="8" parent="8" child="9">
 <linkage id="8" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="9" parent="8" child="10">
 <linkage id="9" parentType="o" childType="d">
 <parent pos="6" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 </sugar>

SNFG-style Graphics

3D Structure Model

download coordinates

General Structure Data

Chemical Formula:	C₆₀H₁₀₂O₅₁		#C	#H	#O
Molec. Weight:	1639		60	102	51
# Atoms:	213
# Residues:	10
# Heavy Atoms:	111

Superclasses:

Hex
Hex	10

Residues:

Residue	Count
B-D-GLCP	9
D-GLC	1

Literature references: 6

1 - 5 of 6 literature references

Reference #12889

Cote F; Cheong JJ; Alba R; Hahn MG

Characterization of binding proteins that recognize oligoglucoside elicitors of phytoalexin synthesis in soybean

Published 1995 in Physiol Plant, 93: 401-410

Reference contains 18 structures

Reference #1509

Hahn MG; Cheong JJ; Alba R; Cote F

Characterization of hepta-.beta.-glucoside elicitor-binding protein(s) in soybean

Published 1994 in Biochem Soc Trans, 22: 408-414

Reference contains 17 structures

Reference #7467

Darvill A; Augur C; Bergmann C; Carlson RW; Cheong JJ; Eberhard S; Hahn MG; Lo VM; Marfa V; Meyer B; Mohnen D; O'Neill MA; Spiro MD; Van Halbeek H; York WS; Albersheim P

Oligosaccharins-oligosaccharides that regulate growth, development and defence responses in plant

Published 1992 in Glycobiology, 2: 181-198

Reference contains 34 structures

Albersheim P; Darvill A; Augur C; Cheong JJ; Eberhard S; Hahn MG; Marfa V; Mohnen D; O'Neill MA; Spiro MD; York WS

Oligosaccharins: Oligosaccharide regulatory molecules

Published 1992 in Acc Chem Res, 25: 77-83

Reference contains 19 structures

Reference #13268

Cheong JJ; Birberg W; Fugedi P; Pilotti A; Garegg PJ; Hong N; Ogawa T; Hahn MG

Structure-activity relationships of oligo-.beta.-glucoside elicitors of phytoalexin accumulation in soybean

Published 1991 in Plant Cell, 3: 127-136

Reference contains 13 structures

■ Expand all ■ Collapse all

© 2017-2018 The Glycosciences.de crew
© 2010-2016 Justus-Liebig University Giessen, Institute of Veterinary Physiology and Biochemistry, Frankfurter Str. 100, 35392 Giessen, Germany
© 1997-2009 German Cancer Research Center Heidelberg, Central Spectroscopic Division, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany
All rights reserved.