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Glycosciences.DB structure entry #27977:

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Format: CarbBank LINUCS GlycoCT_condensed GlycoCT_xml


           a-L-Fucp-(1-3)-D-GlcpNAc


RES
1b:x-dglc-HEX-1:5
2s:n-acetyl
3b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(3+1)3d


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="x" superclass="hex" ringStart="1" ringEnd="5" name="x-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <substituent id="2" name="n-acetyl" />
 <basetype id="3" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-lgal-HEX-1:5|6:d">
 <stemtype id="1" type="lgal" />
 <modification type="d" pos_one="6" />
 </basetype>
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="d" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="1" child="3">
 <linkage id="2" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 </sugar>

SNFG-style Graphics

3D Structure Model

download coordinates

PDB references: 1

1 - 1 of 1 PDB entries

PDB ID 5ajb: X-ray structure of the RSL lectin in complex with Lewis X tetrasaccahride

Description: LECTIN

Source: RALSTONIA SOLANACEARUM

Experimental method: X-RAY DIFFRACTION

Resolution: 1.8Å

Release date: 2016-03-02

Entry features 3 distinct glycan structures [5 instances].

Literature references from PDB entries: 1

1 - 1 of 1 literature references from PDB entries

Reference #15480

Topin J; Lelimousin M; Arnaud J; Audfray A; Pérez S; Varrot A; Imberty A

The Hidden Conformation of Lewis x, a Human Histo-Blood Group Antigen, Is a Determinant for Recognition by Pathogen Lectins.

Published 2016 in ACS Chem. Biol., 11: 2011-20

Reference contains 2 structures

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