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Glycosciences.DB structure entry #2289:
a-D-Neup5Ac-(2-3)-b-D-Galp-(1-4)+
|
b-D-GlcpNAc-(1-6)+
| |
a-L-Fucp-(1-3)+ |
b-D-Galp-(1-1)-ethyl
a-D-Neup5Ac-(2-3)-b-D-Galp-(1-4)+ |
| |
b-D-GlcpNAc-(1-3)+
|
a-L-Fucp-(1-3)+
[][ETHYL]{[(1+1)][B-D-GALP]{[(3+1)][B-D-GLCPNAC]{[(3+1)][A-L-FUCP]{}[(4+1)][B-D-GALP]{[(3+2)][A-D-NEUP5AC]{}}}[(6+1)][B-D-GLCPNAC]{[(3+1)][A-L-FUCP]{}[(4+1)][B-D-GALP]{[(3+2)][A-D-NEUP5AC]{}}}}}
RES
1s:ethyl
2b:b-dgal-HEX-1:5
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:a-lgal-HEX-1:5|6:d
6b:b-dgal-HEX-1:5
7b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
8s:n-acetyl
9b:b-dglc-HEX-1:5
10s:n-acetyl
11b:a-lgal-HEX-1:5|6:d
12b:b-dgal-HEX-1:5
13b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
14s:n-acetyl
LIN
1:1n(1+1)2o
2:2o(3+1)3d
3:3d(2+1)4n
4:3o(3+1)5d
5:3o(4+1)6d
6:6o(3+2)7d
7:7d(5+1)8n
8:2o(6+1)9d
9:9d(2+1)10n
10:9o(3+1)11d
11:9o(4+1)12d
12:12o(3+2)13d
13:13d(5+1)14n
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<substituent id="1" name="ethyl" />
<basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="4" name="n-acetyl" />
<basetype id="5" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-lgal-HEX-1:5|6:d">
<stemtype id="1" type="lgal" />
<modification type="d" pos_one="6" />
</basetype>
<basetype id="6" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="7" anomer="a" superclass="non" ringStart="2" ringEnd="6" name="a-dgro-dgal-NON-2:6|1:a|2:keto|3:d">
<stemtype id="1" type="dgro" />
<stemtype id="2" type="dgal" />
<modification type="a" pos_one="1" />
<modification type="keto" pos_one="2" />
<modification type="d" pos_one="3" />
</basetype>
<substituent id="8" name="n-acetyl" />
<basetype id="9" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="10" name="n-acetyl" />
<basetype id="11" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-lgal-HEX-1:5|6:d">
<stemtype id="1" type="lgal" />
<modification type="d" pos_one="6" />
</basetype>
<basetype id="12" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="13" anomer="a" superclass="non" ringStart="2" ringEnd="6" name="a-dgro-dgal-NON-2:6|1:a|2:keto|3:d">
<stemtype id="1" type="dgro" />
<stemtype id="2" type="dgal" />
<modification type="a" pos_one="1" />
<modification type="keto" pos_one="2" />
<modification type="d" pos_one="3" />
</basetype>
<substituent id="14" name="n-acetyl" />
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="n" childType="o">
<parent pos="1" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="2" child="3">
<linkage id="2" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="3" parent="3" child="4">
<linkage id="3" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="4" parent="3" child="5">
<linkage id="4" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="5" parent="3" child="6">
<linkage id="5" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="6" parent="6" child="7">
<linkage id="6" parentType="o" childType="d">
<parent pos="3" />
<child pos="2" />
</linkage>
</connection>
<connection id="7" parent="7" child="8">
<linkage id="7" parentType="d" childType="n">
<parent pos="5" />
<child pos="1" />
</linkage>
</connection>
<connection id="8" parent="2" child="9">
<linkage id="8" parentType="o" childType="d">
<parent pos="6" />
<child pos="1" />
</linkage>
</connection>
<connection id="9" parent="9" child="10">
<linkage id="9" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="10" parent="9" child="11">
<linkage id="10" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="11" parent="9" child="12">
<linkage id="11" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="12" parent="12" child="13">
<linkage id="12" parentType="o" childType="d">
<parent pos="3" />
<child pos="2" />
</linkage>
</connection>
<connection id="13" parent="13" child="14">
<linkage id="13" parentType="d" childType="n">
<parent pos="5" />
<child pos="1" />
</linkage>
</connection>
</linkages>
</sugar>
- Sialyl Lewis X (Show) (Search Database)
| Chemical Formula: | ||
| Molec. Weight: | ||
| # Atoms: | ||
| # Residues: | 10 | |
| # Heavy Atoms: | ||
Superclasses:
|
Residues:
|
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Literature references: 21 - 2 of 2 literature references
Reference #660
Wong CH; Halcomb RL; Ichikawa Y; Kajimoto T
Enzymes in organic synthesis: application to the problems of carbohydrate recognition (Part 2)
Published 1995 in Angew Chem Int Ed, 34: 521-546
Reference contains 45 structures
Reference #8769
DeFrees SA; Kosch W; Way W; Paulson JC; Sabesan S; Halcomb RL; Huang D-H; Ichikawa Y; Wong CH
Ligand recognition by E-selectin: Synthesis, inhibitory activity, and conformational analysis of bivalent sialyl Lewis X analogs
Published 1995 in J Am Chem Soc, 117: 66-79
Reference contains 7 structures
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