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Glycosciences.DB structure entry #22443:

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Format: CarbBank LINUCS GlycoCT_condensed GlycoCT_xml


a-D-Neup5Ac-(2-8)-a-D-Neup5Ac-(2-3)-b-Galp-(1-4)-b-D-Glcp


RES
1b:b-dglc-HEX-1:5
2b:b-xgal-HEX-1:5
3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
4s:n-acetyl
5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
6s:n-acetyl
LIN
1:1o(4+1)2d
2:2o(3+2)3d
3:3d(5+1)4n
4:3o(8+2)5d
5:5d(5+1)6n


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-xgal-HEX-1:5">
 <stemtype id="1" type="xgal" />
 </basetype>
 <basetype id="3" anomer="a" superclass="non" ringStart="2" ringEnd="6" name="a-dgro-dgal-NON-2:6|1:a|2:keto|3:d">
 <stemtype id="1" type="dgro" />
 <stemtype id="2" type="dgal" />
 <modification type="a" pos_one="1" />
 <modification type="keto" pos_one="2" />
 <modification type="d" pos_one="3" />
 </basetype>
 <substituent id="4" name="n-acetyl" />
 <basetype id="5" anomer="a" superclass="non" ringStart="2" ringEnd="6" name="a-dgro-dgal-NON-2:6|1:a|2:keto|3:d">
 <stemtype id="1" type="dgro" />
 <stemtype id="2" type="dgal" />
 <modification type="a" pos_one="1" />
 <modification type="keto" pos_one="2" />
 <modification type="d" pos_one="3" />
 </basetype>
 <substituent id="6" name="n-acetyl" />
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="o" childType="d">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="2" child="3">
 <linkage id="2" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="2" />
 </linkage>
 </connection>
 <connection id="3" parent="3" child="4">
 <linkage id="3" parentType="d" childType="n">
 <parent pos="5" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="4" parent="3" child="5">
 <linkage id="4" parentType="o" childType="d">
 <parent pos="8" />
 <child pos="2" />
 </linkage>
 </connection>
 <connection id="5" parent="5" child="6">
 <linkage id="5" parentType="d" childType="n">
 <parent pos="5" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 </sugar>

SNFG-style Graphics

3D Structure Model

download coordinates

General Structure Data

Chemical Formula:
Molec. Weight:
# Atoms:
# Residues:	4
# Heavy Atoms:

Superclasses:

Neu		Hex
NeuAc	2	Hex	2

Residues:

Residue	Count
A-D-NEUP5AC	2
B-D-GLCP	1
B-GALP	1

Literature references: 33

1 - 5 of 33 literature references

Reference #15462

Vaccine therapy for small cell lung cancer.

Published 2004 in Semin Oncol, 31: 112-116

Reference contains 2 structures

Reference #15426

Santiago MF; Costa MR; Mendez-Otero R

Immunoblockage of 9-O-acetyl GD3 ganglioside arrests the in vivo migration of cerebellar granule neurons.

Published 2004 in J Neurosci, 24: 474-478

Reference contains 1 structure

Reference #15427

Le Poole IC; Stennett LS; Bonish BK; Dee L; Robinson JK; Hernandez C; Hann SK; Nickoloff BJ

Expansion of vitiligo lesions is associated with reduced epidermal CDw60 expression and increased expression of HLA-DR in perilesional skin.

Published 2003 in Br J Dermatol, 149: 739-748

Reference contains 1 structure

Reference #15325

Malisan F; Testi R

GD3 ganglioside and apoptosis.

Published 2002 in Biochim Biophys Acta, 1585: 179-187

Reference contains 1 structure

Reference #15352

Malisan F ; Franchi L ; Tomassini B ; Ventura N ; Condo I ; Rippo MR ; Rufini A ; Liberati L ; Nachtigall C ; Kniep B ; Testi R

Acetylation suppresses the proapoptotic activity of GD3 ganglioside.

Published 2002 in J Exp Med, 196: 1535-1541

Reference contains 1 structure

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