Glycosciences.de - Glycosciences.DB entry 21

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Glycosciences.DB structure entry #21:

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Format: CarbBank LINUCS GlycoCT_condensed GlycoCT_xml


 a-D-Manp-(1-[2)-a-D-Manp-(1]n-2)-D-Man


RES
1b:x-dman-HEX-x:x
2r:r1
3b:a-dman-HEX-1:5
LIN
1:1o(2+1)2n
2:2n(2+1)3d
REP
REP1:4o(2+1)4d=-1--1
RES
4b:a-dman-HEX-1:5


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="x" superclass="hex" ringStart="-1" ringEnd="-1" name="x-dman-HEX-x:x">
 <stemtype id="1" type="dman" />
 </basetype>
 <repeat id="2" repeatId="1" />
 <basetype id="3" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
 <stemtype id="1" type="dman" />
 </basetype>
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="o" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="2" child="3">
 <linkage id="2" parentType="n" childType="d">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 <repeat>
 <unit id="1" minOccur="-1" maxOccur="-1">
 <residues>
 <basetype id="4" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
 <stemtype id="1" type="dman" />
 </basetype>
 </residues>
 <linkages />
 <internalLinkage parent="4" child="4">
 <linkage id="3" parentType="o" childType="d">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </internalLinkage>
 </unit>
 </repeat>
 </sugar>

SNFG-style Graphics

3D Structure Model

download coordinates

General Structure Data

Chemical Formula:	C₁₈H₃₂O₁₆		#C	#H	#O
Molec. Weight:	504		18	32	16
# Atoms:	66
# Residues:	3
# Heavy Atoms:	34

Superclasses:

Hex
Hex	3

Residues:

Residue	Count
A-D-MANP	2
D-MAN	1

NMR Proton Chemical Shift Info

MHz	500
Temperature	300
Solvent	D2O
Residue	Linkage	Proton	PPM	JFrom	JTo	Hz	Note
D-Man		H1A	5.370			0
D-Man		H2A	3.960			0
a-D-Manp	2	H1	5.299			0
a-D-Manp	2	H2	4.109			0
a-D-Manp	2,2	H1	5.044			0
a-D-Manp	2,2	H2	4.065			0

Literature references: 33

1 - 5 of 33 literature references

Reference #1799

Mandal DK; Kishore N; Brewer CF

Thermodynamics of lectin-carbohydrate interactions. Titration microcalorimetry measurements of the binding of N-linked carbohydrates and ovalbumin to concanavalin A

Published 1994 in Biochemistry, 33: 1149-1156

Reference contains 15 structures

Reference #10177

Montijn RC; van Rinsum J; van Schagen FA; Klis FM

Glucomannoproteins in the cell wall of Saccharomyces cerevisiae contain a novel type of carbohydrate side chain

Published 1994 in J Biol Chem, 269: 19338-19342

Reference contains 8 structures

Reference #6021

Structure and energetics of protein-carbohydrate complexes

Published 1994 in Curr Opin Struct Biol, 4: 719-728

Reference contains 23 structures

Reference #8341

Kobayashi H; Takahashi SI; Shibata N; Miyauchi M; Ishida M; Sato J; Maeda K; Suzuki S

Structural modification of cell wall mannans of Candida albicans serotype A strains grown in yeast extract-Sabouraud liquid medium under acidic conditions

Published 1994 in Infect Immun, 62: 968-973

Reference contains 10 structures

Reference #2724

Ogawa K; Nishikori J; Ino T; Matsuda K

Chemical structures of oligosaccharides obtained from partial acid hydrolysates of Saccharomyces cerevisiae Mannan

Published 1994 in Biosci Biotechnol Biochem, 58: 560-562

Reference contains 6 structures

NCBI Taxonomy ID	Scientific Name
4932	Saccharomyces cerevisiae

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