Glycosciences.de - Glycosciences.DB entry 1710

☰
- Add title
- Add keywords
- Add publication
- Leave comment

Glycosciences.DB structure entry #1710:

■ Expand all ■ Collapse all

Format: CarbBank LINUCS GlycoCT_xml


 a-L-Fucp-(1-2)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-1)-Hexanolamine


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <substituent id="2" name="n-acetyl" />
 <basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
 <stemtype id="1" type="dgal" />
 </basetype>
 <basetype id="4" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-lgal-HEX-1:5|6:d">
 <stemtype id="1" type="lgal" />
 <modification type="d" pos_one="6" />
 </basetype>
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="d" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="1" child="3">
 <linkage id="2" parentType="o" childType="d">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="3" parent="3" child="4">
 <linkage id="3" parentType="o" childType="d">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 <aglyca>
 <historicalData>
 <entry id="0" name="HEXANOLAMINE" toResidue="1">
 <linkage parentType="n" childType="x">
 <parent pos="1" />
 <child pos="1" />
 </linkage>
 </entry>
 </historicalData>
 </aglyca>
 </sugar>

SNFG-style Graphics

3D Structure Model

download coordinates

Corresponding entries: 14

1 - 5 of 14 entries with matching glycan part

Structure entry #147: Blood group H Type 2 Glycan

a-L-Fucp-(1-2)-b-D-Galp-(1-4)-b-D-GlcpNAc

no NMR spectra

literature references

GlycoMaps

Structure entry #283:

a-L-Fucp-(1-2)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)-Asn

NMR spectra

literature references

no GlycoMaps

Structure entry #371:

a-L-Fucp-(1-2)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-9)-9-hydroxy-Nonanoate-(1-1)-Methyl

no 3d model

NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #2035:

a-L-Fucp-(1-2)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-1)-<linker-TMR>

no 3d model

no NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #2545:

a-L-Fucp-(1-2)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-1)-?-3-en-4-deoxy-Hex-ol

no 3d model

no NMR spectra

literature references

no GlycoMaps

Taxons

Blood Group H Antigen (Show) (Search Database)
Lactosamine (Show) (Search Database)

General Structure Data

Chemical Formula:
Molec. Weight:
# Atoms:
# Residues:	4
# Heavy Atoms:

Superclasses:

Hex
Hex	1
dHex	1
HexNAc	1

Residues:

Residue	Count
A-L-FUCP	1
B-D-GALP	1
B-D-GLCPNAC	1
HEXANOLAMINE	1

Literature references: 3

1 - 3 of 3 literature references

Ichikawa Y; Look GC; Wong CH

Enzyme-catalyzed oligosaccharide synthesis

Published 1992 in Anal Biochem, 202: 215-238

Reference contains 87 structures

Reference #1585

Rosevear PR; Nunez HA; Barker R

Synthesis and solution conformation of the type 2 blood-group oligosaccharide .alpha.LFuc(1-2).beta.DGal(1-4).beta.DGlcNAc

Published 1982 in Biochemistry, 21: 1421-1431

Reference contains 1 structure

Reference #12308

Barker R; Nunez HA; Rosevear P; Serianni AS

Carbon-13 NMR analysis of complex carbohydrates

Published 1982 in Methods Enzymol, 83: 58-69

Reference contains 1 structure

■ Expand all ■ Collapse all

© 2010-2016,2022 Justus-Liebig University Giessen, Institute of Veterinary Physiology and Biochemistry, Frankfurter Str. 100, 35392 Giessen, Germany
© 2017-2021 The Glycosciences.de crew
© 1997-2009 German Cancer Research Center Heidelberg, Central Spectroscopic Division, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany
All rights reserved.