Glycosciences.de - Glycosciences.DB entry 16011

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Glycosciences.DB structure entry #16011:

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Format: CarbBank LINUCS GlycoCT_xml


 b-D-Galp-(1-3)-b-D-Galp-(1-4)-b-D-Xylp-(1-O)-<4-methylumbelliferone>


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="b" superclass="pen" ringStart="1" ringEnd="5" name="b-dxyl-PEN-1:5">
 <stemtype id="1" type="dxyl" />
 </basetype>
 <basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
 <stemtype id="1" type="dgal" />
 </basetype>
 <basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
 <stemtype id="1" type="dgal" />
 </basetype>
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="o" childType="d">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="2" child="3">
 <linkage id="2" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 <aglyca>
 <historicalData>
 <entry id="0" name="&lt;4-METHYLUMBELLIFERONE&gt;" toResidue="1">
 <linkage parentType="n" childType="x">
 <parent pos="1" />
 <child pos="1" />
 </linkage>
 </entry>
 </historicalData>
 </aglyca>
 </sugar>

SNFG-style Graphics

Corresponding entries: 3

1 - 3 of 3 entries with matching glycan part

Structure entry #82: Proteoglycan linkage region trisaccharide attached to Ser

b-D-Galp-(1-3)-b-D-Galp-(1-4)-b-D-Xylp-(1-3)-Ser

NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #3589:

b-D-Galp-(1-3)-b-D-Galp-(1-4)-b-D-Xylp-(1-7)-<4-methylumbelliferone>

no 3d model

no NMR spectra

literature references

no GlycoMaps

Structure entry #22962:

b-D-Galp-(1-3)-b-D-Galp-(1-4)-b-D-Xylp

no NMR spectra

no literature references

no Ref

no GlycoMaps

Taxons

General Structure Data

Chemical Formula:
Molec. Weight:
# Atoms:
# Residues:	4
# Heavy Atoms:

Superclasses:

Hex		Pent
Hex	2	Pent	1

Residues:

Residue	Count
<4-METHYLUMBELLIFERONE>	1
B-D-GALP	2
B-D-XYLP	1

Literature references: 2

1 - 2 of 2 literature references

Reference #9224

Takagaki K; Tazawa T; Munakata H; Nakamura T; Endo M

Effect of monensin on the synthesis of .beta.-D-xyloside-initiated glycosaminoglycan and its linkage region oligosaccharides in human skin fibroblasts

Published 1997 in J Biochem, 122: 1129-1132

Reference contains 2 structures

Reference #10227

Etchison JR; Srikrishna G; Freeze HH

A novel method to co-localize glycosaminoglycan-core oligosaccharide glycosyltransferases in rat liver Golgi - Co-localization of galactosyltransferase I with a sialyltransferase

Published 1995 in J Biol Chem, 270: 756-764

Reference contains 5 structures

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