Glycosciences.de - Glycosciences.DB entry 148

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Glycosciences.DB structure entry #148:

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Format: CarbBank LINUCS GlycoCT_condensed GlycoCT_xml


 a-D-GalpNAc-(1-3)+
                  |
             b-D-Galp-(1-4)-D-GlcpNAc
                  |
    a-L-Fucp-(1-2)+


RES
1b:x-dglc-HEX-1:5
2s:n-acetyl
3b:b-dgal-HEX-1:5
4b:a-lgal-HEX-1:5|6:d
5b:a-dgal-HEX-1:5
6s:n-acetyl
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3o(2+1)4d
4:3o(3+1)5d
5:5d(2+1)6n


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="x" superclass="hex" ringStart="1" ringEnd="5" name="x-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <substituent id="2" name="n-acetyl" />
 <basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
 <stemtype id="1" type="dgal" />
 </basetype>
 <basetype id="4" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-lgal-HEX-1:5|6:d">
 <stemtype id="1" type="lgal" />
 <modification type="d" pos_one="6" />
 </basetype>
 <basetype id="5" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dgal-HEX-1:5">
 <stemtype id="1" type="dgal" />
 </basetype>
 <substituent id="6" name="n-acetyl" />
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="d" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="1" child="3">
 <linkage id="2" parentType="o" childType="d">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="3" parent="3" child="4">
 <linkage id="3" parentType="o" childType="d">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="4" parent="3" child="5">
 <linkage id="4" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="5" parent="5" child="6">
 <linkage id="5" parentType="d" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 </sugar>

SNFG-style Graphics

3D Structure Model

download coordinates

Blood Group A Antigen (Show) (Search Database)

General Structure Data

Chemical Formula:	C₂₈H₄₈N₂O₂₀		#C	#H	#O	#N
Molec. Weight:	732		28	48	20	2
# Atoms:	98
# Residues:	4
# Heavy Atoms:	50

Superclasses:

Hex
Hex	1
dHex	1
HexNAc	2

Residues:

Residue	Count
A-D-GALPNAC	1
A-L-FUCP	1
B-D-GALP	1
D-GLCPNAC	1

Literature references: 3

1 - 3 of 3 literature references

Reference #21197

Hobbs JK; Pluvinage B; Boraston AB

Glycan-metabolizing enzymes in microbe-host interactions: the Streptococcus pneumoniae paradigm.

Published 2018 in FEBS Lett., 592: 3865-3897

Reference contains 47 structures

Reference #12770

Baldus SE; Hanisch FG

Mucin-associated antigens as markers of gastrointestinal differentiation and carcinogenesis

Published 1995 in Pathologe, 16: 94-105

Reference contains 19 structures

Ito N; Yokota M; Kawahara S; Morimura Y; Hirano Y; Nagaike C; Uchida K; Hirota T; Matsunaga T

Histochemical demonstration of endo-.beta.-galactosidase susceptible poly-n-acetyllactosamine with the blood group specificities in papillary carcinomas of the human thyroid glands

Published 1994 in Acta Histochem Cytochem, 27: 451-458

Reference contains 5 structures

NCBI Taxonomy ID	Scientific Name
9606	Homo sapiens

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