Glycosciences.de - Glycosciences.DB entry 134

Glycosciences.DB structure entry #134: Lactosylceramide / LacCer

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b-D-Galp-(1-4)-b-D-Glcp-(1-1)-Ceramide

Corresponding entries: 55

1 - 5 of 55 entries with matching glycan part

Structure entry #325:

b-D-Galp-(1-4)-b-D-Glcp-(1-1)-Methyl

no 3d model

NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #1753:

b-D-Galp-(1-4)-b-D-Glcp-(1-1)-2-propenamide

no 3d model

no NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #2240:

b-D-Galp-(1-4)-b-D-Glcp-(1-5)-Gln-(1-2)-Tyr-(1-2)-Gly-(1-2)-Gly-(1-2)-Phe-(1-2)-Leu

no NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #3456:

b-D-Galp-(1-4)-b-D-Glcp-(1-1)-2R-amino-Octadec-4E-en-1,3S-diol

no 3d model

no NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #5958:

b-D-Galp-(1-4)-b-D-Glcp-(1-3)-Ser-(1-2)-Ile-(1-2)-Lys-(1-2)-Val-(1-2)-Ala-(1-2)-Val

no NMR spectra

literature references

no GlycoMaps

Taxons

glycosphingolipid

General Structure Data

Chemical Formula:	C₄₅H₈₅N₁O₁₃		#C	#H	#O	#N
Molec. Weight:	848		45	85	13	1
# Atoms:	144
# Residues:	3
# Heavy Atoms:	59

Superclasses:

Hex
Hex	2

Residues:

Residue	Count
B-D-GALP	1
B-D-GLCP	1
CERAMIDE	1

PDB references: 1

1 - 1 of 1 PDB entries

PDB ID 5j14: Crystal structure of endoglycoceramidase I from Rhodococ-cus equi in complex with GM3

Description: Putative secreted endoglycosylceramidase

Source: Rhodococcus equi 103S

Experimental method: X-RAY DIFFRACTION

Resolution: 1.915Å

Release date: 2016-04-27

Entry features 2 distinct glycan structures [2 instances].

Literature references: 200

1 - 5 of 200 literature references

Reference #20480

Wang Z; Wen L; Ma X; Chen Z; Yu Y; Zhu J; Wang Y; Liu Z; Liu H; Wu D; Zhou D; Li Y

High expression of lactotriaosylceramide, a differentiation-associated glycosphingolipid, in the bone marrow of acute myeloid leukemia patients.

Published 2012 in Glycobiology, 22: 930-8

Reference contains 7 structures

Reference #7992

Shirai T; Itonori S; Tai T; Soares MJ; Shiota K; Ogawa T

Ganglioside composition of the rat choriocarcinoma cell line, Rcho-1

Published 1996 in Glycoconj J, 13: 415-421

Reference contains 5 structures

Reference #8139

Fujita N; Suzuki K; Vanier MT; Popko B; Maeda N; Klein A; Henseler M; Sandhoff K; Nakayasu H; Suzuki K

Targeted disruption of the mouse sphingolipid activator protein gene: a complex phenotype, including severe leukodystrophy and wide-spread storage of multiple sphingolipids

Published 1996 in Hum Mol Genet, 5: 711-725

Reference contains 5 structures

Reference #7064

Ogiso M; Ohta M; Irie A; Hoshi M; Komoto M

Characterization of neutral glycosphingolipids in rat lens

Published 1995 in Exp Eye Res, 60: 193-198

Reference contains 6 structures

Reference #10550

Menoret A; Otry C; Labarriere N; Breimer ME; Piller F; Meflah K; Le Pendu J

The expression of carbohydrate blood group antigens correlates with heat resistance

Published 1995 in J Cell Sci, 108: 1691-1701

Reference contains 6 structures

NCBI Taxonomy ID	Scientific Name
7588	Asteroidea
9913	Bos taurus
9615	Canis familiaris
93934	Coturnix japonica
10029	Cricetulus griseus
9685	Felis catus
9031	Gallus gallus
9606	Homo sapiens
9544	Macaca mulatta
10090	Mus musculus
9986	Oryctolagus cuniculus
10114	Rattus
9823	Sus scrofa

Glyco-CD:

CD17

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