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Glycosciences.DB structure entry #133: Sulfogalactosylceramide / Galactosyl sulfatide
Sulfate-(O-3)-b-D-Galp-(1-1)-Ceramide
[][CERAMIDE]{[(1+1)][B-D-GALP]{[(3+0)][SULFATE]{}}}
- sulfogalactosylceramide
- galactosyl sulfatide
- SM4
- glycosphingolipid
| Chemical Formula: | ||
| Molec. Weight: | ||
| # Atoms: | ||
| # Residues: | 3 | |
| # Heavy Atoms: | ||
Superclasses:
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Residues:
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PDB references: 51 - 5 of 5 PDB entries
PDB ID 4mng:
Structure of the DP10.7 TCR with CD1d-sulfatide
Description: Beta-2-microglobulin, Antigen-presenting glycoprotein CD1d, Cd1d1 protein, TRA@ protein, Ti antigen CD3-associated protein gamma chain V-J-C region
Source: Mus musculus, Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.0058Å
Release date: 2013-12-18
Entry features 2 distinct glycan structures [8 instances].
PDB ID 4mq7:
Structure of human CD1d-sulfatide
Description: Antigen-presenting glycoprotein CD1d, Cd1d1 protein, Beta-2-microglobulin
Source: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6032Å
Release date: 2013-12-18
Entry features 2 distinct glycan structures [2 instances].
PDB ID 3ric:
Crystal Structure of D48V||A47D mutant of Human Glycolipid Transfer Protein complexed with 3-O-sulfo-galactosylceramide containing nervonoyl acyl chain (24:1)
Description: Human Glycolipid Transfer Protein (E.C.2.7.7.7)
Source: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1Å
Release date: 2012-02-08
Entry features 1 distinct glycan structures [1 instances].
PDB ID 3rzn:
Crystal Structure of Human Glycolipid Transfer Protein complexed with 3-O-sulfo-galactosylceramide containing nervonoyl acyl chain (24:1)
Description: Glycolipid transfer protein
Source: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1Å
Release date: 2012-02-08
Entry features 1 distinct glycan structures [1 instances].
PDB ID 3s0i:
Crystal Structure of D48V mutant of Human Glycolipid Transfer Protein complexed with 3-O-sulfo galactosylceramide containing nervonoyl acyl chain
Description: Glycolipid transfer protein
Source: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5Å
Release date: 2012-02-08
Entry features 1 distinct glycan structures [1 instances].
Literature references: 1301 - 5 of 130 literature references
Reference #20740
Dunn TM; Tifft CJ; Proia RL
A perilous path: the inborn errors of sphingolipid metabolism.
Published 2019 in J. Lipid Res., 60: 475-483
Reference contains 9 structures
Reference #21156
Yamada Y; Harada M; Hashimoto K; Guo R; Nakajima T; Kashihara T; Yamada M; Aoyama T; Kamijo Y
Impact of chronic kidney dysfunction on serum Sulfatides and its metabolic pathway in mice.
Published 2019 in Glycoconj. J., 36: 1-11
Reference contains 2 structures
Reference #21222
Sandhoff R; Sandhoff K
Emerging concepts of ganglioside metabolism.
Published 2018 in FEBS Lett., 592: 3835-3864
Reference contains 38 structures
Reference #20517
Breimer ME; Säljö K; Barone A; Teneberg S
Glycosphingolipids of human embryonic stem cells.
Published 2017 in Glycoconj. J., 34: 713-723
Reference contains 30 structures
Reference #5275
Basio A; Buessow H; Adam J; Stoffel W
Galactosphingolipids and axono-glial interaction in myelin of the central nervous system
Published 1998 in Cell Tissue Res, 292: 199-210
Reference contains 1 structure
1 - 2 of 2 literature references from PDB entries
Reference #18721
Luoma AM; Castro CD; Mayassi T; Bembinster LA; Bai L; Picard D; Anderson B; Scharf L; Kung JE; Sibener LV; Savage PB; Jabri B; Bendelac A; Adams EJ
Crystal structure of Vδ1 T cell receptor in complex with CD1d-sulfatide shows MHC-like recognition of a self-lipid by human γδ T cells.
Published 2013 in Immunity, 39: 1032-42
Reference #18018
Samygina VR; Popov AN; Cabo-Bilbao A; Ochoa-Lizarralde B; Goni-de-Cerio F; Zhai X; Molotkovsky JG; Patel DJ; Brown RE; Malinina L
Enhanced selectivity for sulfatide by engineered human glycolipid transfer protein.
Published 2011 in Structure, 19: 1644-54
| NCBI Taxonomy ID | Scientific Name |
| 9913 | Bos taurus |
| 9031 | Gallus gallus |
| 9606 | Homo sapiens |
| 10090 | Mus musculus |
| 9986 | Oryctolagus cuniculus |
| 9940 | Ovis aries |
| 8399 | Rana |
| 10114 | Rattus |
| 9823 | Sus scrofa |
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