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Glycosciences.DB structure entry #128: Galactosylceramide; Galactocerebroside

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Format: CarbBank LINUCS


 b-D-Galp-(1-1)-Ceramide

Corresponding entries: 101

1 - 5 of 101 entries with matching glycan part

Structure entry #582:

b-D-Galp-(1-3)-Ser-(1-2)-Ala-(1-2)-Ala-(1-2)-Gly-(1-2)-Ala

no NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #592:

b-D-Glcp-(1-4)+ | b-D-Galp-(1-3)+ Asn-(1-2)-Tyr-(1-2)-Thr | | b-D-Galp-(1-3)+ Thr-(1-2)-Thr-(1-2)+ | | Ser-(1-2)-Thr-(1-2)+ | Ala-(1-2)+

no 3d model

no NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #602:

b-D-Galp-(1-5)-Hyl

no 3d model

no NMR spectra

literature references

no GlycoMaps

Structure entry #2228:

b-D-Galp-(1-5)-Gln-(1-2)-Tyr-(1-2)-Gly-(1-2)-Gly-(1-2)-Phe-(1-2)-Leu

no 3d model

no NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #2235:

b-D-Galp-(1-4)-Asn-(1-2)-Tyr-(1-2)-Gly-(1-2)-Gly-(1-2)-Phe-(1-2)-Leu

no NMR spectra

literature references

no GlycoMaps

Taxons

galactocerebroside
galactosylceramide
GalCer

glycosphingolipid
cerebroside

General Structure Data

Chemical Formula:	C₃₉H₇₅N₁O₇		#C	#H	#O	#N
Molec. Weight:	670		39	75	7	1
# Atoms:	122
# Residues:	2
# Heavy Atoms:	47

Superclasses:

Hex
Hex	1

Residues:

Residue	Count
B-D-GALP	1
CERAMIDE	1

PDB references: 1

1 - 1 of 1 PDB entries

PDB ID 5kdi: How FAPP2 Selects Simple Glycosphingolipids Using the GLTP-fold

Description: Pleckstrin homology domain-containing family A member 8

Source: Homo sapiens

Experimental method: X-RAY DIFFRACTION

Resolution: 1.45Å

Release date:

Entry features 1 distinct glycan structures [2 instances].

Literature references: 142

1 - 5 of 142 literature references

Reference #21955

Zalem D; Juhás M; Terrinoni M; King-Lyons N; Lebens M; Varrot A; Connell TD; Teneberg S

Characterization of the ganglioside recognition profile of Escherichia coli heat-labile enterotoxin LT-IIc.

Published 2022 in Glycobiology, 32: 391-403

Reference contains 29 structures

Reference #21826

Koga J; Yazawa M; Miyamoto K; Yumoto E; Kubota T; Sakazawa T; Hashimoto S; Sato M; Yamane H

Sphingadienine-1-phosphate levels are regulated by a novel glycoside hydrolase family 1 glucocerebrosidase widely distributed in seed plants.

Published 2021 in J Biol Chem, 297: 101236

Reference contains 4 structures

Reference #21866

Szymczak-Kulus K; Weidler S; Bereznicka A; Mikolajczyk K; Kaczmarek R; Bednarz B; Zhang T; Urbaniak A; Olczak M; Park EY; Majorczyk E; Kapczynska K; Lukasiewicz J; Wuhrer M; Unverzagt C; Czerwinski M

Human Gb3/CD77 synthase produces P1 glycotope-capped N-glycans, which mediate Shiga toxin 1 but not Shiga toxin 2 cell entry.

Published 2021 in J Biol Chem, 296: 100299

Reference contains 12 structures

Reference #21702

Reza S; Ugorski M; Suchański J

Glucosylceramide and galactosylceramide, small glycosphingolipids with significant impact on health and disease.

Published 2021 in Glycobiology, 31: 1416-1434

Reference contains 8 structures

Reference #20740

Dunn TM; Tifft CJ; Proia RL

A perilous path: the inborn errors of sphingolipid metabolism.

Published 2019 in J. Lipid Res., 60: 475-483

Reference contains 9 structures

NCBI Taxonomy ID	Scientific Name
6544	Bivalvia
9913	Bos taurus
9615	Canis familiaris
93934	Coturnix japonica
10026	Cricetinae
6211	Echinococcus multilocularis
9031	Gallus gallus
9606	Homo sapiens
10090	Mus musculus
9986	Oryctolagus cuniculus
10114	Rattus
9376	Soricidae
9823	Sus scrofa

Consortium for Functional Glycomics (CFG):

carbGlipid_20044_D000

GlycoEpitope DB:

EP0074

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