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Glycosciences.DB structure entry #105:
a-D-Glcp-(1-4)-b-D-Glcp-(1-1)-Methyl
[][METHYL]{[(1+1)][B-D-GLCP]{[(4+1)][A-D-GLCP]{}}}
RES
1s:methyl
2b:b-dglc-HEX-1:5
3b:a-dglc-HEX-1:5
LIN
1:1n(1+1)2o
2:2o(4+1)3d
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<substituent id="1" name="methyl" />
<basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="3" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="n" childType="o">
<parent pos="1" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="2" child="3">
<linkage id="2" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
</linkages>
</sugar>
1 - 5 of 34 entries with matching glycan part
Structure entry #2241:
a-D-Glcp-(1-4)-b-D-Glcp-(1-5)+
|
Gln-(1-2)-Gly-(1-2)-Phe-(1-2)-Leu
|
Tyr-(1-2)-Gly-(1-2)+
 |
 |
 |
 : 1 |
 |
Taxons |
Structure entry #4347:
a-D-Glcp-(1-4)-b-D-Glcp-(1-1)-Ceramide
|
|
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: 1 |
|
Taxons |
Structure entry #5193:
a-D-Glcp-(1-4)-b-D-Glcp-(1-4)+
|
Asn-(1-2)-Gly-(1-2)-Gly-(1-2)-Arg-(1-2)-Leu-(1-2)-Lys-(1-2)-Arg
|
Ala-(1-2)-Val-(1-2)-Tyr-(1-2)-Thr-(1-2)-Arg-(1-2)-Ile-(1-2)-Met-(1-2)-Met-(1-2)+
|
|
|
: 1 |
|
Taxons |
Structure entry #5196:
a-D-Glcp-(1-4)-b-D-Glcp-(1-4)-Asn-(1-2)-Ala-(1-2)-Val-(1-2)-Tyr-(1-2)-Thr-(1-2)-Arg-(1-2)-Ile-(1-2)-Met-(1-2)-Met-(1-2)-Asn-(1-2)-Gly-(1-2)-Gly-(1-2)-Arg-(1-2)-Leu-(1-2)-Lys-(1-2)-Arg
 |
|
|
: 1 |
|
Taxons |
Structure entry #7587:
a-D-Glcp-(1-4)-b-D-Glcp
|
|
 : 52 |
: 1 |
 : 1 |
Taxons |
| Chemical Formula: | ||
| Molec. Weight: | ||
| # Atoms: | ||
| # Residues: | 3 | |
| # Heavy Atoms: | ||
Superclasses:
|
Residues:
|
||||||||||||||||
NMR Carbon Chemical Shift Info| MHz | 0 | ||||||
| Temperature | 0 | ||||||
| Solvent | D2O | ||||||
| Note | a)Assignments may have to be interchanged. | ||||||
| Residue | Linkage | Carbon | PPM | JFrom | JTo | Hz | Note |
| b-D-Glcp | 1 | C1 | 104.40 | 0 | |||
| b-D-Glcp | 1 | C2 | 74.60 | 0 | |||
| b-D-Glcp | 1 | C3 | 77.80 | 0 | |||
| b-D-Glcp | 1 | C4 | 78.70 | 0 | |||
| b-D-Glcp | 1 | C5 | 76.10 | 0 | |||
| b-D-Glcp | 1 | C6 | 62.30 | 0 | |||
| b-D-Glcp | 1 | C7 | 58.70 | 0 | |||
| a-D-Glcp | 4,1 | C1 | 101.10 | 0 | |||
| a-D-Glcp | 4,1 | C2 | 74.30 | 0 | a | ||
| a-D-Glcp | 4,1 | C3 | 74.60 | 0 | |||
| a-D-Glcp | 4,1 | C4 | 70.90 | 0 | |||
| a-D-Glcp | 4,1 | C5 | 73.40 | 0 | a | ||
| a-D-Glcp | 4,1 | C6 | 62.30 | 0 | |||
PDB references: 51 - 5 of 5 PDB entries
PDB ID 6hk0:
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) F16'S pore mutant (F247S) with alternate M4 conformation.
Description: Cys-loop ligand-gated ion channel
Source: Dickeya chrysanthemi
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45Å
Release date: 2019-10-09
Entry features 1 distinct glycan structures [10 instances].
PDB ID 5kum:
Crystal Structure of Inward Rectifier Kir2.2 K62W Mutant In Complex with PIP2
Description: ATP-sensitive inward rectifier potassium channel 12
Source: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8Å
Release date: 2016-08-10
Entry features 1 distinct glycan structures [1 instances].
PDB ID 4oh3:
Crystal structure of a nitrate transporter
Description: Nitrate transporter 1.1
Source: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25Å
Release date: 2014-03-05
Entry features 1 distinct glycan structures [2 instances].
PDB ID 4hho:
Serum paraoxonase-1 by directed evolution with the H115W mutation
Description: SERUM PARAOXONASE BY DIRECTED EVOLUTION
Source: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1Å
Release date: 2013-03-27
Entry features 1 distinct glycan structures [1 instances].
PDB ID 4hhq:
Serum paraoxonase-1 by directed evolution with the H115Q and H134Q mutations
Description: SERUM PARAOXONASE BY DIRECTED EVOLUTION (E.C.3.1.1.2)
Source: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3Å
Release date: 2013-03-27
Entry features 1 distinct glycan structures [1 instances].
Literature references: 41 - 4 of 4 literature references
Reference #41
Bock K; Pedersen H
Synthesis of 6-(S) Deuterium-Labelled Derivatives of Maltose and Isomaltose
Published 1988 in Acta Chem Scand B, 42: 190-195
Reference contains 3 structures
Reference #13646
Bock K
Carbohydrate-protein interactions: Substrate specificity of enzymes used in the degradation of oligosaccharides related to starch and cellulose
Published 1987 in Pure Appl Chem, 59: 1447-1456
Reference contains 6 structures
Reference #97
Bock K; Pedersen C; Pedersen H
Carbon-13 nuclear magnetic resonance data for oligosaccharides
Published 1984 in Adv Carbohydr Chem Biochem, 42: 193-225
Reference contains 227 structures
Reference #10339
Bock K; Pedersen H
Assignment of the NMR parameters of the branch-point trisaccharide of amylopectin using 2-D NMR spectroscopy at 500-MHz
Published 1984 in J Carbohydr Chem, 3: 581-592
Reference contains 2 structures
1 - 3 of 3 literature references from PDB entries
Reference #20021
Lee SJ; Ren F; Zangerl-Plessl EM; Heyman S; Stary-Weinzinger A; Yuan P; Nichols CG
Structural basis of control of inward rectifier Kir2 channel gating by bulk anionic phospholipids.
Published 2016 in J. Gen. Physiol., 148: 227-37
Reference #18809
Sun J; Bankston JR; Payandeh J; Hinds TR; Zagotta WN; Zheng N
Crystal structure of the plant dual-affinity nitrate transporter NRT1.1.
Published 2014 in Nature, 507: 73-7
Reference #18419
Ben-David M; Wieczorek G; Elias M; Silman I; Sussman JL; Tawfik DS
Catalytic metal ion rearrangements underline promiscuity and evolvability of a metalloenzyme.
Published 2013 in J. Mol. Biol., 425: 1028-38
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